BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003A02LP1|AL425048
(988 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig330 1643 0.0
3x_Contig458 100 9e-21
>3x_Contig330
Length = 1954
Score = 1643 bits (827), Expect = 0.0
Identities = 832/835 (99%)
Strand = Plus / Minus
Query: 1 caatctcaaattaacaacgaatctaagcgactgttcacttcatcgcgtttggtattattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 caatctcaaattaacaacgaatctaagcgactgttcacttcatcgcgtttggtattattt 776
Query: 61 gcctcttcctccaaaactccgtaaatgatgtctttgataatggtagcacctttttcatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gcctcttcctccaaaactccgtaaatgatgtctttgataatggtagcacctttttcatag 716
Query: 121 tcactaggttcgttgaaaacctgaacagaaaatctaataaacaagtgactgttgttaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 tcactaggttcgttgaaaacctgaacagaaaatctaataaacaagtgactgttgttaatt 656
Query: 181 tggaatggcgcataacatttatactctgcgagcatgatcttatcacatttactcttaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tggaatggcgcataacatttatactctgcgagcatgatcttatcacatttactcttaaag 596
Query: 241 tttaggaaataaattctatcakttctcatcttttcaatkagatgttgacattccgattta 300
||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||
Sbjct: 595 tttaggaaataaattctatcagtactcatcttttcaatgagatgttgacattccgattta 536
Query: 301 atcggtaattctatacagaataatccgggtgaacgtaaagaattagtcgagttttcaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 atcggtaattctatacagaataatccgggtgaacgtaaagaattagtcgagttttcaagt 476
Query: 361 agaacagatccttggccaaaaacctccaaaatctttggaatagcagcttcttgcaaatcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 agaacagatccttggccaaaaacctccaaaatctttggaatagcagcttcttgcaaatcc 416
Query: 421 cattgatattctcgaatcttttcttcaccgccgcatatgtccttacggaatttcaatgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 cattgatattctcgaatcttttcttcaccgccgcatatgtccttacggaatttcaatgct 356
Query: 481 tcctccacagcaaaataggacgagtacgaaacggtgccgataaaggcaaatttgttaaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tcctccacagcaaaataggacgagtacgaaacggtgccgataaaggcaaatttgttaaca 296
Query: 541 aggatgttagaattatgtccatcgtcaccctcaacatattggcatgcaggagctgtatag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aggatgttagaattatgtccatcgtcaccctcaacatattggcatgcaggagctgtatag 236
Query: 601 ttatgagatatggggatggtctgaatcataacatgatgttttggatcaacatataacaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 ttatgagatatggggatggtctgaatcataacatgatgttttggatcaacatataacaac 176
Query: 661 gcgacagatttagggcaagaaagccatttgtgtaggttagtcgtgagaaagtccggtttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 gcgacagatttagggcaagaaagccatttgtgtaggttagtcgtgagaaagtccggtttc 116
Query: 721 aattcattaacaaatgcaaaatcaacttgacctgcagcatgtgcaccatcgaccagagac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 aattcattaacaaatgcaaaatcaacttgacctgcagcatgtgcaccatcgaccagagac 56
Query: 781 caagtcccatatttacgacacaattggattagttctttataaggtaatgtcgcgc 835
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 caagtcccatatttacgacacaattggattagttctttataaggtaatgtcgcgc 1
>3x_Contig458
Length = 2388
Score = 99.8 bits (50), Expect = 9e-21
Identities = 100/114 (87%), Gaps = 2/114 (1%)
Strand = Plus / Plus
Query: 832 gcgccaggttgagaagtaatcatatcaaagaggcacaccttatattctttagtttgcaaa 891
||||||||| |||| | |||||| || |||| |||| ||| ||| |||||||| |||||
Sbjct: 79 gcgccaggtggagagg-aatcatttctaagaagcacgcctgataggctttagttggcaaa 137
Query: 892 cgtttttcgaaatcttgcacaatcacatcattgccgcatgggtagttgatatcg 945
||| ||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 138 cgtgtttcgaaatcttgcacaatcacatcattgccgcat-ggtatttgatatcg 190
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6939
Number of Sequences: 1807
Number of extensions: 6939
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 2
length of query: 988
length of database: 10,358,551
effective HSP length: 16
effective length of query: 972
effective length of database: 10,329,639
effective search space: 10040409108
effective search space used: 10040409108
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)